diff --git a/src/LGraphCanvas.ts b/src/LGraphCanvas.ts
index 4f5796890..782c7aa54 100644
--- a/src/LGraphCanvas.ts
+++ b/src/LGraphCanvas.ts
@@ -36,6 +36,7 @@ import type { ClipboardItems, SubgraphIO } from "./types/serialisation"
 import type { NeverNever } from "./types/utility"
 import type { PickNevers } from "./types/utility"
 import type { IBaseWidget } from "./types/widgets"
+import type { UUID } from "./utils/uuid"
 
 import { LinkConnector } from "@/canvas/LinkConnector"
 
@@ -46,7 +47,7 @@ import { strokeShape } from "./draw"
 import { NullGraphError } from "./infrastructure/NullGraphError"
 import { LGraphGroup } from "./LGraphGroup"
 import { LGraphNode, type NodeId, type NodeProperty } from "./LGraphNode"
-import { LiteGraph, Rectangle, SubgraphNode } from "./litegraph"
+import { createUuidv4, LiteGraph, Rectangle, SubgraphNode } from "./litegraph"
 import { type LinkId, LLink } from "./LLink"
 import {
   containsRect,
@@ -188,6 +189,8 @@ interface ClipboardPasteResult {
   links: Map<LinkId, LLink>
   /** Map: original reroute IDs to newly created reroutes */
   reroutes: Map<RerouteId, Reroute>
+  /** Map: original subgraph IDs to newly created subgraphs */
+  subgraphs: Map<UUID, Subgraph>
 }
 
 /** Options for {@link LGraphCanvas.pasteFromClipboard}. */
@@ -2106,9 +2109,21 @@ export class LGraphCanvas implements CustomEventDispatcher<LGraphCanvasEventMap>
 
     // clone node ALT dragging
     if (LiteGraph.alt_drag_do_clone_nodes && e.altKey && !e.ctrlKey && node && this.allow_interaction) {
+      let newType = node.type
+
+      if (node instanceof SubgraphNode) {
+        const cloned = node.subgraph
+          .clone()
+          .asSerialisable()
+
+        const subgraph = graph.createSubgraph(cloned)
+        subgraph.configure(cloned)
+        newType = subgraph.id
+      }
+
       const node_data = node.clone()?.serialize()
       if (node_data?.type != null) {
-        const cloned = LiteGraph.createNode(node_data.type)
+        const cloned = LiteGraph.createNode(newType)
         if (cloned) {
           cloned.configure(node_data)
           cloned.pos[0] += 5
@@ -3305,8 +3320,11 @@ export class LGraphCanvas implements CustomEventDispatcher<LGraphCanvasEventMap>
       groups: [],
       reroutes: [],
       links: [],
+      subgraphs: [],
     }
 
+    const subgraphs = new Set<Subgraph>()
+
     // Create serialisable objects
     for (const item of items ?? this.selectedItems) {
       if (item instanceof LGraphNode) {
@@ -3328,6 +3346,11 @@ export class LGraphCanvas implements CustomEventDispatcher<LGraphCanvasEventMap>
             if (link) serialisable.links.push(link)
           }
         }
+
+        // Find all unique referenced subgraphs
+        if (item instanceof SubgraphNode) {
+          subgraphs.add(item.subgraph)
+        }
       } else if (item instanceof LGraphGroup) {
         // Groups
         serialisable.groups.push(item.serialize())
@@ -3337,6 +3360,15 @@ export class LGraphCanvas implements CustomEventDispatcher<LGraphCanvasEventMap>
       }
     }
 
+    // Add unique subgraph entries
+    // TODO: Must find all nested subgraphs
+    for (const subgraph of subgraphs) {
+      const cloned = subgraph
+        .clone(true)
+        .asSerialisable()
+      serialisable.subgraphs.push(cloned)
+    }
+
     localStorage.setItem(
       "litegrapheditor_clipboard",
       JSON.stringify(serialisable),
@@ -3391,6 +3423,7 @@ export class LGraphCanvas implements CustomEventDispatcher<LGraphCanvasEventMap>
     parsed.groups ??= []
     parsed.reroutes ??= []
     parsed.links ??= []
+    parsed.subgraphs ??= []
 
     // Find top-left-most boundary
     let offsetX = Infinity
@@ -3415,11 +3448,23 @@ export class LGraphCanvas implements CustomEventDispatcher<LGraphCanvasEventMap>
       nodes: new Map<NodeId, LGraphNode>(),
       links: new Map<LinkId, LLink>(),
       reroutes: new Map<RerouteId, Reroute>(),
+      subgraphs: new Map<UUID, Subgraph>(),
     }
     const { created, nodes, links, reroutes } = results
 
     // const failedNodes: ISerialisedNode[] = []
 
+    // Subgraphs
+    for (const info of parsed.subgraphs) {
+      // SubgraphV2: Remove always-clone behaviour
+      const originalId = info.id
+      info.id = createUuidv4()
+
+      const subgraph = graph.createSubgraph(info)
+      subgraph.configure(info)
+      results.subgraphs.set(originalId, subgraph)
+    }
+
     // Groups
     for (const info of parsed.groups) {
       info.id = -1
@@ -3432,6 +3477,10 @@ export class LGraphCanvas implements CustomEventDispatcher<LGraphCanvasEventMap>
 
     // Nodes
     for (const info of parsed.nodes) {
+      // If the subgraph was cloned, update references to use the new subgraph ID.
+      const subgraph = results.subgraphs.get(info.type)
+      if (subgraph) info.type = subgraph.id
+
       const node = info.type == null ? null : LiteGraph.createNode(info.type)
       if (!node) {
         // failedNodes.push(info)
diff --git a/src/subgraph/Subgraph.ts b/src/subgraph/Subgraph.ts
index b40dfc4d7..3801bd31a 100644
--- a/src/subgraph/Subgraph.ts
+++ b/src/subgraph/Subgraph.ts
@@ -211,8 +211,17 @@ export class Subgraph extends LGraph implements BaseLGraph, Serialisable<Exporte
     this.outputNode.draw(ctx, colorContext)
   }
 
-  clone(): Subgraph {
-    return new Subgraph(this.rootGraph, this.asSerialisable())
+  /**
+   * Clones the subgraph, creating an identical copy with a new ID.
+   * @returns A new subgraph with the same configuration, but a new ID.
+   */
+  clone(keepId: boolean = false): Subgraph {
+    const exported = this.asSerialisable()
+    if (!keepId) exported.id = createUuidv4()
+
+    const subgraph = new Subgraph(this.rootGraph, exported)
+    subgraph.configure(exported)
+    return subgraph
   }
 
   override asSerialisable(): ExportedSubgraph & Required<Pick<SerialisableGraph, "nodes" | "groups" | "extra">> {
diff --git a/src/types/serialisation.ts b/src/types/serialisation.ts
index 1590ebc9a..4587b3c21 100644
--- a/src/types/serialisation.ts
+++ b/src/types/serialisation.ts
@@ -180,6 +180,7 @@ export interface ClipboardItems {
   groups?: ISerialisedGroup[]
   reroutes?: SerialisableReroute[]
   links?: SerialisableLLink[]
+  subgraphs?: ExportedSubgraph[]
 }
 
 /** @deprecated */