Merge pull request #29 from microsoft/crutcher-python

This PR adds the hooks for python binding and also adds testing environment for different functions available in mscclpp.h.
This commit is contained in:
Saeed Maleki
2023-03-25 12:04:35 -07:00
committed by GitHub
13 changed files with 565 additions and 0 deletions

3
.gitignore vendored
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.vscode/
build/
__pycache__
.*.swp
.idea/

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python/.gitignore vendored Normal file
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.*.swp
.venv/

72
python/CMakeLists.txt Normal file
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project(mscclpp)
cmake_minimum_required(VERSION 3.18...3.22)
find_package(Python 3.9 COMPONENTS Interpreter Development.Module REQUIRED)
if (NOT CMAKE_BUILD_TYPE AND NOT CMAKE_CONFIGURATION_TYPES)
set(CMAKE_BUILD_TYPE Release CACHE STRING "Choose the type of build." FORCE)
set_property(CACHE CMAKE_BUILD_TYPE PROPERTY STRINGS "Debug" "Release" "MinSizeRel" "RelWithDebInfo")
endif()
# Create CMake targets for all Python components needed by nanobind
if (CMAKE_VERSION VERSION_GREATER_EQUAL 3.26)
find_package(Python 3.8 COMPONENTS Interpreter Development.Module Development.SABIModule REQUIRED)
else()
find_package(Python 3.8 COMPONENTS Interpreter Development.Module REQUIRED)
endif()
# Detect the installed nanobind package and import it into CMake
execute_process(
COMMAND "${Python_EXECUTABLE}" -c "import nanobind; print(nanobind.cmake_dir())"
OUTPUT_STRIP_TRAILING_WHITESPACE OUTPUT_VARIABLE NB_DIR)
list(APPEND CMAKE_PREFIX_PATH "${NB_DIR}")
find_package(nanobind CONFIG REQUIRED)
set(CUDA_DIR "/usr/local/cuda")
set(MSCCLPP_DIR ${CMAKE_CURRENT_LIST_DIR}/../build)
nanobind_add_module(
_py_mscclpp
NOSTRIP
NB_STATIC
src/_py_mscclpp.cpp
)
target_include_directories(
_py_mscclpp
PUBLIC
${CUDA_DIR}/include
${MSCCLPP_DIR}/include
)
target_link_directories(
_py_mscclpp
PUBLIC
${CUDA_DIR}/lib
${MSCCLPP_DIR}/lib
)
target_link_libraries(
_py_mscclpp
PUBLIC
mscclpp
)
add_custom_target(build-package ALL DEPENDS _py_mscclpp)
add_custom_command(
TARGET build-package POST_BUILD
COMMAND ${CMAKE_COMMAND} -E copy_directory
${CMAKE_CURRENT_SOURCE_DIR}/src/mscclpp
${CMAKE_CURRENT_BINARY_DIR}/mscclpp)
add_custom_command(
TARGET build-package POST_BUILD
COMMAND ${CMAKE_COMMAND} -E copy
$<TARGET_FILE:_py_mscclpp>
${CMAKE_CURRENT_BINARY_DIR}/mscclpp/)
add_custom_command(
TARGET build-package POST_BUILD
COMMAND ${CMAKE_COMMAND} -E copy
${MSCCLPP_DIR}/lib/libmscclpp.so
${CMAKE_CURRENT_BINARY_DIR}/mscclpp/)

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python/Makefile Normal file
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test:
./test.sh

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python/README.md Normal file
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# Python bindings
Test instructions:
* Compile the `libmscclpp.so` library.
* Install `cmake` verion >= 3.18
* setup a python virtual env
* `pip install -r requirements.txt`
* `./tesh.sh`
Rough build attemtps
```
# cd to this directory:
# setup/enter pyenv environment for python 3.9
# install nanabind and the test requirements.
pip install -r requirements.txt
# setup and build the CMake environments.
# this requires nanobind, installed above.
./setup.sh
# test the module
pytest build/mscclpp
```
## Installing `gdrcopy` and `mpi`
This assumes that some things are built/installed
```
# assumes WORKDIR has:
# git clone git@github.com/NVIDIA/gdrcopy.git
# git clone git@github.com:microsoft/mscclpp.git
uname -r
# 5.4.0-1090-azure
# install
# break /usr/sbin/policy-rc.d so we can install modules
echo '#!/bin/sh
exit 0' > /usr/sbin/policy-rc.d
apt update
apt install -y \
build-essential devscripts debhelper check \
libsubunit-dev fakeroot pkg-config dkms \
linux-headers-5.4.0-1090-azure
apt install -y nvidia-dkms-525-server
cd $WORKDIR/gdrcopy
sed -i 's/\(-L \$(CUDA)\/lib64\)/\1 \1\/stubs/' tests/Makefile
cd packages
CUDA=/usr/local/cuda ./build-deb-packages.sh
dpkg -i gdrdrv-dkms_2.3-1_amd64.Ubuntu20_04.deb
dpkg -i libgdrapi_2.3-1_amd64.Ubuntu20_04.deb
dpkg -i gdrcopy-tests_2.3-1_amd64.Ubuntu20_04+cuda11.6.deb
dpkg -i gdrcopy_2.3-1_amd64.Ubuntu20_04.deb
# validate:
# $ sanity
# Running suite(s): Sanity
# 100%: Checks: 27, Failures: 0, Errors: 0
# dkms install -m gdrdrv/2.3
cd $WORKDIR/mscclpp
## numctl
apt install -y numactl libnuma-dev libnuma1
# if not mpi testing
USE_MPI_FOR_TESTS=0 make -j
```

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python/ci.sh Executable file
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#!/bin/bash
# CI hook script.
set -ex
# CD to this directory.
SCRIPT_DIR=$( cd -- "$( dirname -- "${BASH_SOURCE[0]}" )" &> /dev/null && pwd )
cd $SCRIPT_DIR
# clean env
rm -rf .venv build
# setup a python virtual env
python -m venv .venv
# activate the virtual env
source .venv/bin/activate
# install venv deps.
pip install -r requirements.txt
# run the build and test.
./test.sh

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python/format.sh Executable file
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#!/bin/bash
clang-format -style='{
"BasedOnStyle": "google",
"BinPackParameters": false,
"BinPackArguments": false,
"AlignAfterOpenBracket": "AlwaysBreak"
}' -i src/*.cpp

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python/requirements.txt Normal file
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nanobind
pytest
PyHamcrest

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python/setup.sh Executable file
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#!/bin/bash
set -ex
cmake -S . -B build
cmake --build build --clean-first -v

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python/src/_py_mscclpp.cpp Normal file
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#include <mscclpp.h>
#include <nanobind/nanobind.h>
#include <nanobind/stl/string.h>
#include <cstdio>
#include <cstring>
#include <memory>
#include <stdexcept>
#include <string>
namespace nb = nanobind;
using namespace nb::literals;
// This is a poorman's substitute for std::format, which is a C++20 feature.
template <typename... Args>
std::string string_format(const std::string &format, Args... args) {
// Shutup format warning.
#pragma GCC diagnostic push
#pragma GCC diagnostic ignored "-Wformat-security"
// Dry-run to the get the buffer size:
// Extra space for '\0'
int size_s = std::snprintf(nullptr, 0, format.c_str(), args...) + 1;
if (size_s <= 0) {
throw std::runtime_error("Error during formatting.");
}
// allocate buffer
auto size = static_cast<size_t>(size_s);
std::unique_ptr<char[]> buf(new char[size]);
// actually format
std::snprintf(buf.get(), size, format.c_str(), args...);
// Bulid the return string.
// We don't want the '\0' inside
return std::string(buf.get(), buf.get() + size - 1);
#pragma GCC diagnostic pop
}
// Maybe return the value, maybe throw an exception.
template <typename... Args>
void checkResult(
mscclppResult_t status, const std::string &format, Args... args) {
switch (status) {
case mscclppSuccess:
return;
case mscclppUnhandledCudaError:
case mscclppSystemError:
case mscclppInternalError:
case mscclppRemoteError:
case mscclppInProgress:
case mscclppNumResults:
throw std::runtime_error(string_format(format, args...));
case mscclppInvalidArgument:
case mscclppInvalidUsage:
default:
throw std::invalid_argument(string_format(format, args...));
}
}
// Maybe return the value, maybe throw an exception.
template <typename Val, typename... Args>
Val maybe(
mscclppResult_t status, Val val, const std::string &format, Args... args) {
checkResult(status, format, args...);
return val;
}
// Wrapper around connection state.
struct MscclppComm {
mscclppComm_t _handle;
bool _is_open = false;
public:
~MscclppComm() { close(); }
// Close should be safe to call on a closed handle.
void close() {
if (_is_open) {
checkResult(mscclppCommDestroy(_handle), "Failed to close comm channel");
_handle = 0;
_is_open = false;
}
}
void check_open() {
if (!_is_open) {
throw std::invalid_argument("MscclppComm is not open");
}
}
};
static const std::string DOC_MscclppUniqueId =
"MSCCLPP Unique Id; used by the MPI Interface";
static const std::string DOC_MscclppComm = "MSCCLPP Communications Handle";
NB_MODULE(_py_mscclpp, m) {
m.doc() = "Python bindings for MSCCLPP: which is not NCCL";
m.attr("MSCCLPP_UNIQUE_ID_BYTES") = MSCCLPP_UNIQUE_ID_BYTES;
nb::class_<mscclppUniqueId>(m, "MscclppUniqueId")
.def_ro_static("__doc__", &DOC_MscclppUniqueId)
.def_static(
"from_context",
[]() {
mscclppUniqueId uniqueId;
return maybe(
mscclppGetUniqueId(&uniqueId),
uniqueId,
"Failed to get MSCCLP Unique Id.");
},
nb::call_guard<nb::gil_scoped_release>())
.def_static(
"from_bytes",
[](nb::bytes source) {
if (source.size() != MSCCLPP_UNIQUE_ID_BYTES) {
throw std::invalid_argument(string_format(
"Requires exactly %d bytes; found %d",
MSCCLPP_UNIQUE_ID_BYTES,
source.size()));
}
mscclppUniqueId uniqueId;
std::memcpy(
uniqueId.internal, source.c_str(), sizeof(uniqueId.internal));
return uniqueId;
})
.def("bytes", [](mscclppUniqueId id) {
return nb::bytes(id.internal, sizeof(id.internal));
});
nb::class_<MscclppComm>(m, "MscclppComm")
.def_ro_static("__doc__", &DOC_MscclppComm)
.def_static(
"init_rank_from_address",
[](const std::string &address, int rank, int world_size) {
MscclppComm comm = {0};
comm._is_open = true;
return maybe(
mscclppCommInitRank(
&comm._handle, world_size, address.c_str(), rank),
comm,
"Failed to initialize comms: %s rank=%d world_size=%d",
address,
rank,
world_size);
},
nb::call_guard<nb::gil_scoped_release>(),
"address"_a,
"rank"_a,
"world_size"_a,
"Initialize comms given an IP address, rank, and world_size")
.def_static(
"init_rank_from_id",
[](const mscclppUniqueId &id, int rank, int world_size) {
MscclppComm comm = {0};
comm._is_open = true;
return maybe(
mscclppCommInitRankFromId(&comm._handle, world_size, id, rank),
comm,
"Failed to initialize comms: %02X%s rank=%d world_size=%d",
id.internal,
rank,
world_size);
},
nb::call_guard<nb::gil_scoped_release>(),
"id"_a,
"rank"_a,
"world_size"_a,
"Initialize comms given u UniqueID, rank, and world_size")
.def(
"opened",
[](MscclppComm &comm) { return comm._is_open; },
"Is this comm object opened?")
.def(
"closed",
[](MscclppComm &comm) { return !comm._is_open; },
"Is this comm object closed?")
.def(
"rank",
[](MscclppComm &comm) {
comm.check_open();
int rank;
return maybe(
mscclppCommRank(comm._handle, &rank),
rank,
"Failed to retrieve MSCCLPP rank");
},
nb::call_guard<nb::gil_scoped_release>(),
"The rank of this node.")
.def(
"size",
[](MscclppComm &comm) {
comm.check_open();
int size;
return maybe(
mscclppCommSize(comm._handle, &size),
size,
"Failed to retrieve MSCCLPP world size");
},
nb::call_guard<nb::gil_scoped_release>(),
"The world size of this node.")
.def(
"connection_setup",
[](MscclppComm &comm) {
comm.check_open();
return maybe(
mscclppConnectionSetup(comm._handle),
true,
"Failed to settup MSCCLPP connection");
},
nb::call_guard<nb::gil_scoped_release>(),
"Run connection setup for MSCCLPP.")
.def(
"launch_proxy",
[](MscclppComm &comm) {
comm.check_open();
return maybe(
mscclppProxyLaunch(comm._handle),
true,
"Failed to launch MSCCLPP proxy");
},
nb::call_guard<nb::gil_scoped_release>(),
"Start the MSCCLPP proxy.")
.def(
"stop_proxy",
[](MscclppComm &comm) {
comm.check_open();
return maybe(
mscclppProxyStop(comm._handle),
true,
"Failed to stop MSCCLPP proxy");
},
nb::call_guard<nb::gil_scoped_release>(),
"Start the MSCCLPP proxy.")
.def(
"close",
&MscclppComm::close,
nb::call_guard<nb::gil_scoped_release>())
.def(
"__del__",
&MscclppComm::close,
nb::call_guard<nb::gil_scoped_release>())
.def(
"bootstrap_all_gather",
[](MscclppComm &comm, void *data, int size) {
comm.check_open();
return maybe(
mscclppBootstrapAllGather(comm._handle, data, size),
true,
"Failed to stop MSCCLPP proxy");
},
nb::call_guard<nb::gil_scoped_release>());
}

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from . import _py_mscclpp
__all__ = (
"MscclppUniqueId",
"MSCCLPP_UNIQUE_ID_BYTES",
"MscclppComm",
)
MscclppUniqueId = _py_mscclpp.MscclppUniqueId
MSCCLPP_UNIQUE_ID_BYTES = _py_mscclpp.MSCCLPP_UNIQUE_ID_BYTES
MscclppComm = _py_mscclpp.MscclppComm

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import concurrent.futures
import unittest
import hamcrest
import mscclpp
class UniqueIdTest(unittest.TestCase):
def test_no_constructor(self) -> None:
hamcrest.assert_that(
hamcrest.calling(mscclpp.MscclppUniqueId).with_args(),
hamcrest.raises(
TypeError,
"no constructor",
),
)
def test_getUniqueId(self) -> None:
myId = mscclpp.MscclppUniqueId.from_context()
hamcrest.assert_that(
myId.bytes(),
hamcrest.has_length(mscclpp.MSCCLPP_UNIQUE_ID_BYTES),
)
# from_bytes should work
copy = mscclpp.MscclppUniqueId.from_bytes(myId.bytes())
hamcrest.assert_that(
copy.bytes(),
hamcrest.equal_to(myId.bytes()),
)
# bad size
hamcrest.assert_that(
hamcrest.calling(mscclpp.MscclppUniqueId.from_bytes).with_args(b'abc'),
hamcrest.raises(
ValueError,
f"Requires exactly {mscclpp.MSCCLPP_UNIQUE_ID_BYTES} bytes; found 3"
),
)
def all_gather_task(rank: int, world_size: int) -> None:
comm_options = dict(
address="127.0.0.1:50000",
rank=rank,
world_size=world_size,
)
print(f'{comm_options=}', flush=True)
comm = mscclpp.MscclppComm.init_rank_from_address(**comm_options)
buf = bytearray(world_size)
buf[rank] = rank
if False:
# crashes, bad call structure..
comm.bootstrap_all_gather(memoryview(buf), world_size)
hamcrest.assert_that(
buf,
hamcrest.equal_to(b'\000\002'),
)
comm.close()
class CommsTest(unittest.TestCase):
def test_all_gather(self) -> None:
world_size = 2
tasks: list[concurrent.futures.Future[None]] = []
with concurrent.futures.ProcessPoolExecutor(max_workers=world_size) as pool:
for rank in range(world_size):
tasks.append(pool.submit(all_gather_task, rank, world_size))
for f in concurrent.futures.as_completed(tasks):
f.result()

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#!/bin/bash
set -ex
if ! [ -d build ] ; then
./setup.sh
fi
cmake --build build
pytest build/mscclpp